ABC_GWH
A cookbook to study Genome Wide Heterogeneity in introgression rates
The following cited articles are crucial methodological advances for inferences in population genomics, seven must-read articles for students.
.Beaumont MA, Zhang W, Balding DJ (2002) Approximate bayesian computation in population genetics. Genetics 162: 2025–2035.
.Hudson RR (2002) Generating samples under a wright-fisher neutral model of genetic variation. Bioinformatics 18: 337–338.
.Thornton K (2003) Libsequence: a C++ class library for evolutionary genetic analysis. Bioinformatic(17):2325-7.
.Fagundes NJR, Ray N, Beaumont M, Neuenschwander S, Salzano FM, et al. (2007) Statistical evaluation of alternative models of human evolution. Proc Natl Acad Sci U S A 104: 17614–17619.
.Ross-Ibarra J, Wright SI, Foxe JP, Kawabe A, DeRose-Wilson L, et al. (2008) Patterns of polymorphism and demographic history in natural populations of arabidopsis lyrata. PLoS One 3:e2411.
.Ross-Ibarra J, Tenaillon M, Gaut BS (2009) Historical divergence and gene flow in the genus zea. Genetics 181: 1399–1413.
.Csillery K, Francois O, Blum MGB (2012) abc: an r package for approximate bayesian computa-
tion (abc). Methods in Ecology and Evolution.